ReDisulphID

a tool for identifying drug-targetable redox-active disulphides

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T cell receptor beta variable 9

Intramolecular
Cysteine 42 and cysteine 110
Cysteine 8 and cysteine 7
A redox-regulated disulphide may form within T cell receptor beta variable 9 between cysteines 42 and 110 (26 and 94 respectively in this structure).

Details

Redox score ?
81
PDB code
6avg
Structure name
crystal structure of the kfj37 tcr-ny-eso-1-hla-b*07:02 complex
Structure deposition date
2017-09-02
Thiol separation (Å)
2
Half-sphere exposure sum ?
86
Minimum pKa ?
nan
% buried
nan
Peptide accession
A0A0B4J1U6
Residue number A
42
Residue number B
110
Peptide name
T cell receptor beta variable 9

Ligandability

Cysteine 42 of T cell receptor beta variable 9

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 110 of T cell receptor beta variable 9

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within T cell receptor beta variable 9 between cysteines 8 and 7 (148 and 213 respectively in this structure).

Details

Redox score ?
nan
PDB code
6avg
Structure name
crystal structure of the kfj37 tcr-ny-eso-1-hla-b*07:02 complex
Structure deposition date
2017-09-02
Thiol separation (Å)
2
Half-sphere exposure sum ?
94
Minimum pKa ?
nan
% buried
nan
Peptide accession
A0A0B4J1U6
Residue number A
8
Residue number B
7
Peptide name
T cell receptor beta variable 9

Ligandability

Cysteine 8 of T cell receptor beta variable 9

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 7 of T cell receptor beta variable 9

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Uncertain whether structure cysteine 148 has been assigned to correct residue.
Uncertain whether structure cysteine 213 has been assigned to correct residue.
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