ReDisulphID

a tool for identifying drug-targetable redox-active disulphides

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Anti-HCV NS3/4A serine protease immoglobulin heavy chain

Intramolecular
Cysteine 22 and cysteine 95
Cysteine 50 and cysteine 104
A redox-regulated disulphide may form within Anti-HCV NS3/4A serine protease immoglobulin heavy chain between cysteines 22 and 95 (22 and 96 respectively in this structure).

Details

Redox score ?
79
PDB code
5hdo
Structure name
crystal structure of a nanobody raised against urokinase-type plasminogen activator
Structure deposition date
2016-01-05
Thiol separation (Å)
2
Half-sphere exposure sum ?
90
Minimum pKa ?
nan
% buried
nan
Peptide accession
A0A0F6YEF6
Residue number A
22
Residue number B
95
Peptide name
Anti-HCV NS3/4A serine protease immoglobulin heavy chain

Ligandability

Cysteine 22 of Anti-HCV NS3/4A serine protease immoglobulin heavy chain

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 95 of Anti-HCV NS3/4A serine protease immoglobulin heavy chain

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Anti-HCV NS3/4A serine protease immoglobulin heavy chain between cysteines 50 and 104.

Details

Redox score ?
nan
PDB code
5hdo
Structure name
crystal structure of a nanobody raised against urokinase-type plasminogen activator
Structure deposition date
2016-01-05
Thiol separation (Å)
2
Half-sphere exposure sum ?
72
Minimum pKa ?
nan
% buried
nan
Peptide accession
A0A0F6YEF6
Residue number A
50
Residue number B
104
Peptide name
Anti-HCV NS3/4A serine protease immoglobulin heavy chain

Ligandability

Cysteine 50 of Anti-HCV NS3/4A serine protease immoglobulin heavy chain

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 104 of Anti-HCV NS3/4A serine protease immoglobulin heavy chain

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 50 in protein A could not be asigned to a Uniprot residue.
Cysteine 104 in protein B could not be asigned to a Uniprot residue.
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