ReDisulphID

a tool for identifying drug-targetable redox-active disulphides

Ig-like domain-containing protein

Intermolecular
Cysteine 105 of Immunoglobulin lambda constant 3 and cysteine 245
Intramolecular
Cysteine 169 and cysteine 169
Cysteine 169 and cysteine 251
Cysteine 251 and cysteine 251
Cysteine 41 and cysteine 117
Cysteine 169 and cysteine 225
A redox-regulated disulphide may form between cysteine 105 of Immunoglobulin lambda constant 3 and cysteine 245 of Ig-like domain-containing protein (211 and 216 respectively in this structure).

Details

Redox score ?
91
PDB code
4o5l
Structure name
crystal structure of broadly neutralizing antibody f045-092
Structure deposition date
2013-12-19
Thiol separation (Å)
2
Half-sphere exposure sum ?
nan
Minimum pKa ?
nan
% buried
nan
Peptide A name
Immunoglobulin lambda constant 3
Peptide B name
Ig-like domain-containing protein
Peptide A accession
P0DOY3
Peptide B accession
A8K008
Peptide A residue number
105
Peptide B residue number
245

Ligandability

Cysteine 105 of Immunoglobulin lambda constant 3

Cysteine 245 of Ig-like domain-containing protein

A redox-regulated disulphide may form within Ig-like domain-containing protein between cysteines 169 and 169 (100 and 100 respectively in this structure).

Details

Redox score ?
90
PDB code
4o5l
Structure name
crystal structure of broadly neutralizing antibody f045-092
Structure deposition date
2013-12-19
Thiol separation (Å)
2
Half-sphere exposure sum ?
12
Minimum pKa ?
nan
% buried
nan
Peptide accession
A8K008
Residue number A
169
Residue number B
169
Peptide name
Ig-like domain-containing protein

Ligandability

A redox-regulated disulphide may form within Ig-like domain-containing protein between cysteines 169 and 251 (100 and 100 respectively in this structure).

Details

Redox score ?
90
PDB code
4o5l
Structure name
crystal structure of broadly neutralizing antibody f045-092
Structure deposition date
2013-12-19
Thiol separation (Å)
2
Half-sphere exposure sum ?
12
Minimum pKa ?
nan
% buried
nan
Peptide accession
A8K008
Residue number A
169
Residue number B
251
Peptide name
Ig-like domain-containing protein

Ligandability

Cysteine 169 of Ig-like domain-containing protein

Cysteine 251 of Ig-like domain-containing protein

A redox-regulated disulphide may form within Ig-like domain-containing protein between cysteines 251 and 251 (100 and 100 respectively in this structure).

Details

Redox score ?
90
PDB code
4o5l
Structure name
crystal structure of broadly neutralizing antibody f045-092
Structure deposition date
2013-12-19
Thiol separation (Å)
2
Half-sphere exposure sum ?
12
Minimum pKa ?
nan
% buried
nan
Peptide accession
A8K008
Residue number A
251
Residue number B
251
Peptide name
Ig-like domain-containing protein

Ligandability

A redox-regulated disulphide may form within Ig-like domain-containing protein between cysteines 41 and 117 (22 and 92 respectively in this structure).

Details

Redox score ?
80
PDB code
3cfj
Structure name
crystal structure of catalytic elimination antibody 34e4, orthorhombic crystal form
Structure deposition date
2008-03-04
Thiol separation (Å)
2
Half-sphere exposure sum ?
81
Minimum pKa ?
nan
% buried
nan
Peptide accession
A8K008
Residue number A
41
Residue number B
117
Peptide name
Ig-like domain-containing protein

Ligandability

Cysteine 41 of Ig-like domain-containing protein

Cysteine 117 of Ig-like domain-containing protein

A redox-regulated disulphide may form within Ig-like domain-containing protein between cysteines 169 and 225 (147 and 203 respectively in this structure).

Details

Redox score ?
79
PDB code
6ugv
Structure name
crystal structure of the fab fragment of anti-tnfa antibody infliximab (remicade) in a i-centered orthorhombic crystal form, lot c
Structure deposition date
2019-09-26
Thiol separation (Å)
2
Half-sphere exposure sum ?
84
Minimum pKa ?
nan
% buried
nan
Peptide accession
A8K008
Residue number A
169
Residue number B
225
Peptide name
Ig-like domain-containing protein

Ligandability

Cysteine 169 of Ig-like domain-containing protein

Cysteine 225 of Ig-like domain-containing protein

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