ReDisulphID

a tool for identifying drug-targetable redox-active disulphides

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SH2 domain-containing protein 1B

Intramolecular
Cysteine 15 and cysteine 43
Cysteine 41 and cysteine 43
Cysteine 15 and cysteine 41
A redox-regulated disulphide may form within SH2 domain-containing protein 1B between cysteines 15 and 43.

Details

Redox score ?
75
PDB code
5kaz
Structure name
human sh2d1b structure
Structure deposition date
2016-06-02
Thiol separation (Å)
4
Half-sphere exposure sum ?
82
Minimum pKa ?
7
% buried
74
Peptide accession
O14796
Residue number A
15
Residue number B
43
Peptide name
SH2 domain-containing protein 1B

Ligandability

Cysteine 15 of SH2 domain-containing protein 1B

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 43 of SH2 domain-containing protein 1B

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within SH2 domain-containing protein 1B between cysteines 41 and 43. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
55
PDB code
5kaz
Structure name
human sh2d1b structure
Structure deposition date
2016-06-02
Thiol separation (Å)
5
Half-sphere exposure sum ?
87
Minimum pKa ?
10
% buried
67
Peptide accession
O14796
Residue number A
41
Residue number B
43
Peptide name
SH2 domain-containing protein 1B

Ligandability

Cysteine 41 of SH2 domain-containing protein 1B

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 43 of SH2 domain-containing protein 1B

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within SH2 domain-containing protein 1B between cysteines 15 and 41. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
52
PDB code
5kaz
Structure name
human sh2d1b structure
Structure deposition date
2016-06-02
Thiol separation (Å)
8
Half-sphere exposure sum ?
75
Minimum pKa ?
7
% buried
54
Peptide accession
O14796
Residue number A
15
Residue number B
41
Peptide name
SH2 domain-containing protein 1B

Ligandability

Cysteine 15 of SH2 domain-containing protein 1B

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 41 of SH2 domain-containing protein 1B

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

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