ReDisulphID

a tool for identifying drug-targetable redox-active disulphides

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cAMP-dependent protein kinase type II-beta regulatory subunit

Intermolecular
Cysteine 200 of cAMP-dependent protein kinase and cysteine 114
Cysteine 200 of cAMP-dependent protein kinase catalytic subunit alpha and cysteine 114
Intramolecular
Cysteine 342 and cysteine 371
A redox-regulated disulphide may form between cysteine 200 of cAMP-dependent protein kinase and cysteine 114 of cAMP-dependent protein kinase type II-beta regulatory subunit (199 and 114 respectively in this structure).

Details

Redox score ?
68
PDB code
3tnq
Structure name
structure and allostery of the pka riib tetrameric holoenzyme
Structure deposition date
2011-09-01
Thiol separation (Å)
5
Half-sphere exposure sum ?
67
Minimum pKa ?
6
% buried
100
Peptide A name
cAMP-dependent protein kinase
Peptide B name
cAMP-dependent protein kinase type II-beta regulatory subunit
Peptide A accession
A1L1M0
Peptide B accession
P31324
Peptide A residue number
200
Peptide B residue number
114

Ligandability

Cysteine 200 of cAMP-dependent protein kinase

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 114 of cAMP-dependent protein kinase type II-beta regulatory subunit

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form between cysteine 200 of cAMP-dependent protein kinase catalytic subunit alpha and cysteine 114 of cAMP-dependent protein kinase type II-beta regulatory subunit (254 and 114 respectively in this structure). However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
41
PDB code
6wjg
Structure name
pka riibeta holoenzyme with dnajb1-pkac fusion in fibrolamellar hepatoceullar carcinoma
Structure deposition date
2020-04-13
Thiol separation (Å)
8
Half-sphere exposure sum ?
65
Minimum pKa ?
11
% buried
68
Peptide A name
cAMP-dependent protein kinase catalytic subunit alpha
Peptide B name
cAMP-dependent protein kinase type II-beta regulatory subunit
Peptide A accession
P17612
Peptide B accession
P12369
Peptide A residue number
200
Peptide B residue number
114

Ligandability

Cysteine 200 of cAMP-dependent protein kinase catalytic subunit alpha

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 114 of cAMP-dependent protein kinase type II-beta regulatory subunit

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within cAMP-dependent protein kinase type II-beta regulatory subunit between cysteines 342 and 371. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
47
PDB code
3tnp
Structure name
structure and allostery of the pka riib tetrameric holoenzyme
Structure deposition date
2011-09-01
Thiol separation (Å)
8
Half-sphere exposure sum ?
65
Minimum pKa ?
11
% buried
60
Peptide accession
P31324
Residue number A
342
Residue number B
371
Peptide name
cAMP-dependent protein kinase type II-beta regulatory subunit

Ligandability

Cysteine 342 of cAMP-dependent protein kinase type II-beta regulatory subunit

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 371 of cAMP-dependent protein kinase type II-beta regulatory subunit

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

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