ReDisulphID

a tool for identifying drug-targetable redox-active disulphides

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Nucleoside diphosphate-linked moiety X motif 6

Intramolecular
Cysteine 239 and cysteine 243
Cysteine 243 and cysteine 246
A redox-regulated disulphide may form within Nucleoside diphosphate-linked moiety X motif 6 between cysteines 239 and 243.

Details

Redox score ?
64
PDB code
3h95
Structure name
crystal structure of the nudix domain of nudt6
Structure deposition date
2009-04-30
Thiol separation (Å)
6
Half-sphere exposure sum ?
55
Minimum pKa ?
10
% buried
22
Peptide accession
P53370
Residue number A
239
Residue number B
243
Peptide name
Nucleoside diphosphate-linked moiety X motif 6

Ligandability

Cysteine 239 of Nucleoside diphosphate-linked moiety X motif 6

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 243 of Nucleoside diphosphate-linked moiety X motif 6

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Nucleoside diphosphate-linked moiety X motif 6 between cysteines 243 and 246. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
57
PDB code
3h95
Structure name
crystal structure of the nudix domain of nudt6
Structure deposition date
2009-04-30
Thiol separation (Å)
6
Half-sphere exposure sum ?
66
Minimum pKa ?
12
% buried
56
Peptide accession
P53370
Residue number A
243
Residue number B
246
Peptide name
Nucleoside diphosphate-linked moiety X motif 6

Ligandability

Cysteine 243 of Nucleoside diphosphate-linked moiety X motif 6

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 246 of Nucleoside diphosphate-linked moiety X motif 6

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

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