ReDisulphID

a tool for identifying drug-targetable redox-active disulphides

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Polycystin-1

Intramolecular
Cysteine 3084 and cysteine 3289
Cysteine 3081 and cysteine 3289
Cysteine 3081 and cysteine 3084
Cysteine 3284 and cysteine 3289
Cysteine 3283 and cysteine 3284
Cysteine 3084 and cysteine 3284
A redox-regulated disulphide may form within Polycystin-1 between cysteines 3084 and 3289.

Details

Redox score ?
75
PDB code
6a70
Structure name
structure of the human pkd1/pkd2 complex
Structure deposition date
2018-06-29
Thiol separation (Å)
4
Half-sphere exposure sum ?
73
Minimum pKa ?
7
% buried
68
Peptide accession
P98161
Residue number A
3084
Residue number B
3289
Peptide name
Polycystin-1

Ligandability

Cysteine 3084 of Polycystin-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 3289 of Polycystin-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Polycystin-1 between cysteines 3081 and 3289.

Details

Redox score ?
66
PDB code
6a70
Structure name
structure of the human pkd1/pkd2 complex
Structure deposition date
2018-06-29
Thiol separation (Å)
6
Half-sphere exposure sum ?
77
Minimum pKa ?
7
% buried
52
Peptide accession
P98161
Residue number A
3081
Residue number B
3289
Peptide name
Polycystin-1

Ligandability

Cysteine 3081 of Polycystin-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 3289 of Polycystin-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Polycystin-1 between cysteines 3081 and 3084.

Details

Redox score ?
61
PDB code
6a70
Structure name
structure of the human pkd1/pkd2 complex
Structure deposition date
2018-06-29
Thiol separation (Å)
5
Half-sphere exposure sum ?
66
Minimum pKa ?
10
% buried
54
Peptide accession
P98161
Residue number A
3081
Residue number B
3084
Peptide name
Polycystin-1

Ligandability

Cysteine 3081 of Polycystin-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 3084 of Polycystin-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Polycystin-1 between cysteines 3284 and 3289. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
44
PDB code
6a70
Structure name
structure of the human pkd1/pkd2 complex
Structure deposition date
2018-06-29
Thiol separation (Å)
9
Half-sphere exposure sum ?
74
Minimum pKa ?
7
% buried
72
Peptide accession
P98161
Residue number A
3284
Residue number B
3289
Peptide name
Polycystin-1

Ligandability

Cysteine 3284 of Polycystin-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 3289 of Polycystin-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Polycystin-1 between cysteines 3283 and 3284. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
43
PDB code
6a70
Structure name
structure of the human pkd1/pkd2 complex
Structure deposition date
2018-06-29
Thiol separation (Å)
8
Half-sphere exposure sum ?
68
Minimum pKa ?
10
% buried
74
Peptide accession
P98161
Residue number A
3283
Residue number B
3284
Peptide name
Polycystin-1

Ligandability

Cysteine 3283 of Polycystin-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 3284 of Polycystin-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Polycystin-1 between cysteines 3084 and 3284. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
34
PDB code
6a70
Structure name
structure of the human pkd1/pkd2 complex
Structure deposition date
2018-06-29
Thiol separation (Å)
9
Half-sphere exposure sum ?
63
Minimum pKa ?
11
% buried
74
Peptide accession
P98161
Residue number A
3084
Residue number B
3284
Peptide name
Polycystin-1

Ligandability

Cysteine 3084 of Polycystin-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 3284 of Polycystin-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

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