ReDisulphID

a tool for identifying drug-targetable redox-active disulphides

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Guanylate cyclase soluble subunit beta-1

Intermolecular
Cysteine 595 of Guanylate cyclase soluble subunit alpha-1 and cysteine 434
Intramolecular
Cysteine 214 and cysteine 232
Cysteine 489 and cysteine 571
Cysteine 232 and cysteine 248
Cysteine 497 and cysteine 571
Cysteine 434 and cysteine 434
Cysteine 232 and cysteine 323
A redox-regulated disulphide may form between cysteine 595 of Guanylate cyclase soluble subunit alpha-1 and cysteine 434 of Guanylate cyclase soluble subunit beta-1 (595 and 476 respectively in this structure).

Details

Redox score ?
69
PDB code
3uvj
Structure name
crystal structure of the catalytic domain of the heterodimeric human soluble guanylate cyclase 1
Structure deposition date
2011-11-30
Thiol separation (Å)
4
Half-sphere exposure sum ?
76
Minimum pKa ?
8
% buried
84
Peptide A name
Guanylate cyclase soluble subunit alpha-1
Peptide B name
Guanylate cyclase soluble subunit beta-1
Peptide A accession
Q02108
Peptide B accession
Q02153
Peptide A residue number
595
Peptide B residue number
434

Ligandability

Cysteine 595 of Guanylate cyclase soluble subunit alpha-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 434 of Guanylate cyclase soluble subunit beta-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Uncertain whether structure cysteine 476 has been assigned to correct residue.
A redox-regulated disulphide may form within Guanylate cyclase soluble subunit beta-1 between cysteines 214 and 232. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
51
PDB code
6jt1
Structure name
structure of human soluble guanylate cyclase in the heme oxidised state
Structure deposition date
2019-04-08
Thiol separation (Å)
7
Half-sphere exposure sum ?
68
Minimum pKa ?
11
% buried
72
Peptide accession
Q02153
Residue number A
214
Residue number B
232
Peptide name
Guanylate cyclase soluble subunit beta-1

Ligandability

Cysteine 214 of Guanylate cyclase soluble subunit beta-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 232 of Guanylate cyclase soluble subunit beta-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Guanylate cyclase soluble subunit beta-1 between cysteines 489 and 571. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
40
PDB code
7d9r
Structure name
structure of huamn soluble guanylate cyclase in the riociguat and no- bound state
Structure deposition date
2020-10-14
Thiol separation (Å)
10
Half-sphere exposure sum ?
54
Minimum pKa ?
10
% buried
32
Peptide accession
Q02153
Residue number A
489
Residue number B
571
Peptide name
Guanylate cyclase soluble subunit beta-1

Ligandability

Cysteine 489 of Guanylate cyclase soluble subunit beta-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 571 of Guanylate cyclase soluble subunit beta-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Guanylate cyclase soluble subunit beta-1 between cysteines 232 and 248. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
38
PDB code
6jt2
Structure name
structure of human soluble guanylate cyclase in the no activated state
Structure deposition date
2019-04-08
Thiol separation (Å)
10
Half-sphere exposure sum ?
64
Minimum pKa ?
10
% buried
44
Peptide accession
Q02153
Residue number A
232
Residue number B
248
Peptide name
Guanylate cyclase soluble subunit beta-1

Ligandability

Cysteine 232 of Guanylate cyclase soluble subunit beta-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 248 of Guanylate cyclase soluble subunit beta-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Guanylate cyclase soluble subunit beta-1 between cysteines 497 and 571. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
38
PDB code
2wz1
Structure name
structure of the catalytic domain of human soluble guanylate cyclase 1 beta 3
Structure deposition date
2009-11-23
Thiol separation (Å)
9
Half-sphere exposure sum ?
77
Minimum pKa ?
10
% buried
76
Peptide accession
Q02153
Residue number A
497
Residue number B
571
Peptide name
Guanylate cyclase soluble subunit beta-1

Ligandability

Cysteine 497 of Guanylate cyclase soluble subunit beta-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 571 of Guanylate cyclase soluble subunit beta-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Guanylate cyclase soluble subunit beta-1 between cysteines 434 and 434 (434 and 476 respectively in this structure). However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
34
PDB code
3uvj
Structure name
crystal structure of the catalytic domain of the heterodimeric human soluble guanylate cyclase 1
Structure deposition date
2011-11-30
Thiol separation (Å)
9
Half-sphere exposure sum ?
76
Minimum pKa ?
12
% buried
76
Peptide accession
Q02153
Residue number A
434
Residue number B
434
Peptide name
Guanylate cyclase soluble subunit beta-1

Ligandability

Cysteine 434 of Guanylate cyclase soluble subunit beta-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 434 of Guanylate cyclase soluble subunit beta-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Uncertain whether structure cysteine 476 has been assigned to correct residue.
A redox-regulated disulphide may form within Guanylate cyclase soluble subunit beta-1 between cysteines 232 and 323. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
31
PDB code
6jt2
Structure name
structure of human soluble guanylate cyclase in the no activated state
Structure deposition date
2019-04-08
Thiol separation (Å)
9
Half-sphere exposure sum ?
80
Minimum pKa ?
12
% buried
88
Peptide accession
Q02153
Residue number A
232
Residue number B
323
Peptide name
Guanylate cyclase soluble subunit beta-1

Ligandability

Cysteine 232 of Guanylate cyclase soluble subunit beta-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 323 of Guanylate cyclase soluble subunit beta-1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

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