ReDisulphID

a tool for identifying drug-targetable redox-active disulphides

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Macrophage-expressed gene 1 protein

Intramolecular
Cysteine 436 and cysteine 442
Cysteine 412 and cysteine 465
Cysteine 432 and cysteine 446
Cysteine 497 and cysteine 513
Cysteine 557 and cysteine 577
Cysteine 385 and cysteine 397
Cysteine 34 and cysteine 70
Cysteine 534 and cysteine 572
Cysteine 350 and cysteine 369
A redox-regulated disulphide may form within Macrophage-expressed gene 1 protein between cysteines 436 and 442.

Details

Redox score ?
87
PDB code
6sb4
Structure name
crystal structure of murine perforin-2 p2 domain crystal form 2
Structure deposition date
2019-07-18
Thiol separation (Å)
3
Half-sphere exposure sum ?
24
Minimum pKa ?
9
% buried
0
Peptide accession
A1L314
Residue number A
436
Residue number B
442
Peptide name
Macrophage-expressed gene 1 protein

Ligandability

Cysteine 436 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 442 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Macrophage-expressed gene 1 protein between cysteines 412 and 465 (395 and 448 respectively in this structure).

Details

Redox score ?
87
PDB code
6u2w
Structure name
em structure of mpeg-1(l425k) pre-pore complex bound to liposome
Structure deposition date
2019-08-20
Thiol separation (Å)
2
Half-sphere exposure sum ?
57
Minimum pKa ?
nan
% buried
nan
Peptide accession
Q2M385
Residue number A
412
Residue number B
465
Peptide name
Macrophage-expressed gene 1 protein

Ligandability

Cysteine 412 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 465 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Macrophage-expressed gene 1 protein between cysteines 432 and 446.

Details

Redox score ?
86
PDB code
6sb4
Structure name
crystal structure of murine perforin-2 p2 domain crystal form 2
Structure deposition date
2019-07-18
Thiol separation (Å)
3
Half-sphere exposure sum ?
26
Minimum pKa ?
8
% buried
0
Peptide accession
A1L314
Residue number A
432
Residue number B
446
Peptide name
Macrophage-expressed gene 1 protein

Ligandability

Cysteine 432 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 446 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Macrophage-expressed gene 1 protein between cysteines 497 and 513 (480 and 496 respectively in this structure).

Details

Redox score ?
82
PDB code
6u2j
Structure name
em structure of mpeg-1 (l425k, alpha conformation) soluble pre-pore complex
Structure deposition date
2019-08-20
Thiol separation (Å)
2
Half-sphere exposure sum ?
78
Minimum pKa ?
nan
% buried
nan
Peptide accession
Q2M385
Residue number A
497
Residue number B
513
Peptide name
Macrophage-expressed gene 1 protein

Ligandability

Cysteine 497 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 513 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Macrophage-expressed gene 1 protein between cysteines 557 and 577 (540 and 560 respectively in this structure).

Details

Redox score ?
81
PDB code
6u23
Structure name
em structure of mpeg-1(w
Structure deposition date
2019-08-19
Thiol separation (Å)
2
Half-sphere exposure sum ?
81
Minimum pKa ?
nan
% buried
nan
Peptide accession
Q2M385
Residue number A
557
Residue number B
577
Peptide name
Macrophage-expressed gene 1 protein

Ligandability

Cysteine 557 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 577 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Macrophage-expressed gene 1 protein between cysteines 385 and 397 (368 and 380 respectively in this structure).

Details

Redox score ?
81
PDB code
6u2j
Structure name
em structure of mpeg-1 (l425k, alpha conformation) soluble pre-pore complex
Structure deposition date
2019-08-20
Thiol separation (Å)
4
Half-sphere exposure sum ?
56
Minimum pKa ?
9
% buried
11
Peptide accession
Q2M385
Residue number A
385
Residue number B
397
Peptide name
Macrophage-expressed gene 1 protein

Ligandability

Cysteine 385 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 397 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Macrophage-expressed gene 1 protein between cysteines 34 and 70 (17 and 53 respectively in this structure).

Details

Redox score ?
79
PDB code
6u2j
Structure name
em structure of mpeg-1 (l425k, alpha conformation) soluble pre-pore complex
Structure deposition date
2019-08-20
Thiol separation (Å)
4
Half-sphere exposure sum ?
62
Minimum pKa ?
9
% buried
20
Peptide accession
Q2M385
Residue number A
34
Residue number B
70
Peptide name
Macrophage-expressed gene 1 protein

Ligandability

Cysteine 34 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 70 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Macrophage-expressed gene 1 protein between cysteines 534 and 572 (517 and 555 respectively in this structure).

Details

Redox score ?
77
PDB code
6u2j
Structure name
em structure of mpeg-1 (l425k, alpha conformation) soluble pre-pore complex
Structure deposition date
2019-08-20
Thiol separation (Å)
4
Half-sphere exposure sum ?
51
Minimum pKa ?
9
% buried
38
Peptide accession
Q2M385
Residue number A
534
Residue number B
572
Peptide name
Macrophage-expressed gene 1 protein

Ligandability

Cysteine 534 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 572 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Macrophage-expressed gene 1 protein between cysteines 350 and 369 (333 and 352 respectively in this structure).

Details

Redox score ?
75
PDB code
6u2j
Structure name
em structure of mpeg-1 (l425k, alpha conformation) soluble pre-pore complex
Structure deposition date
2019-08-20
Thiol separation (Å)
4
Half-sphere exposure sum ?
63
Minimum pKa ?
9
% buried
40
Peptide accession
Q2M385
Residue number A
350
Residue number B
369
Peptide name
Macrophage-expressed gene 1 protein

Ligandability

Cysteine 350 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 369 of Macrophage-expressed gene 1 protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

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