a tool for identifying drug-targetable redox-active disulphides

Thymic stromal lymphopoietin

Intramolecular

Cysteine 34 and cysteine 110

Cysteine 90 and cysteine 137

Cysteine 69 and cysteine 75

A redox-regulated disulphide may form within Thymic stromal lymphopoietin between cysteines 34 and 110.

Details

Redox score ?

89

PDB code

Structure name

structural basis for tslp antagonism by the therapeutic antibody tezepelumab (medi9929 / amg-157)

Structure deposition date

2016-03-28

Thiol separation (Å)

2

Half-sphere exposure sum ?

52

Minimum pK_a ?

nan

% buried

nan

Peptide accession

Residue number A

34

Residue number B

110

Peptide name

Thymic stromal lymphopoietin

Ligandability

Cysteine 34 of Thymic stromal lymphopoietin

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 110 of Thymic stromal lymphopoietin

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Thymic stromal lymphopoietin between cysteines 90 and 137.

Details

Redox score ?

88

PDB code

Structure name

structural basis for tslp antagonism by the therapeutic antibody tezepelumab (medi9929 / amg-157)

Structure deposition date

2016-03-28

Thiol separation (Å)

2

Half-sphere exposure sum ?

45

Minimum pK_a ?

nan

% buried

nan

Peptide accession

Residue number A

90

Residue number B

137

Peptide name

Thymic stromal lymphopoietin

Ligandability

Cysteine 90 of Thymic stromal lymphopoietin

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 137 of Thymic stromal lymphopoietin

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Thymic stromal lymphopoietin between cysteines 69 and 75.

Details

Redox score ?

82

PDB code

Structure name

structural basis for tslp antagonism by the therapeutic antibody tezepelumab (medi9929 / amg-157)

Structure deposition date

2016-03-28

Thiol separation (Å)

2

Half-sphere exposure sum ?

78

Minimum pK_a ?

nan

% buried

nan

Peptide accession

Residue number A

69

Residue number B

75

Peptide name

Thymic stromal lymphopoietin

Ligandability

Cysteine 69 of Thymic stromal lymphopoietin

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 75 of Thymic stromal lymphopoietin

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

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