ReDisulphID

a tool for identifying drug-targetable redox-active disulphides

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Zinc finger CW-type PWWP domain protein 1

Intramolecular
Cysteine 264 and cysteine 296
Cysteine 264 and cysteine 285
Cysteine 259 and cysteine 285
Cysteine 259 and cysteine 264
Cysteine 259 and cysteine 296
Cysteine 285 and cysteine 296
Cysteine 253 and cysteine 271
A redox-regulated disulphide may form within Zinc finger CW-type PWWP domain protein 1 between cysteines 264 and 296.

Details

Redox score ?
89
PDB code
2rr4
Structure name
complex structure of the zf-cw domain and the h3k4me3 peptide
Structure deposition date
2010-03-24
Thiol separation (Å)
4
Half-sphere exposure sum ?
48
Minimum pKa ?
6
% buried
4
Peptide accession
Q9H0M4
Residue number A
264
Residue number B
296
Peptide name
Zinc finger CW-type PWWP domain protein 1

Ligandability

Cysteine 264 of Zinc finger CW-type PWWP domain protein 1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 296 of Zinc finger CW-type PWWP domain protein 1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Zinc finger CW-type PWWP domain protein 1 between cysteines 264 and 285.

Details

Redox score ?
89
PDB code
2rr4
Structure name
complex structure of the zf-cw domain and the h3k4me3 peptide
Structure deposition date
2010-03-24
Thiol separation (Å)
4
Half-sphere exposure sum ?
55
Minimum pKa ?
6
% buried
16
Peptide accession
Q9H0M4
Residue number A
264
Residue number B
285
Peptide name
Zinc finger CW-type PWWP domain protein 1

Ligandability

Cysteine 264 of Zinc finger CW-type PWWP domain protein 1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 285 of Zinc finger CW-type PWWP domain protein 1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Zinc finger CW-type PWWP domain protein 1 between cysteines 259 and 285 (21 and 47 respectively in this structure).

Details

Redox score ?
88
PDB code
2e61
Structure name
solution structure of the zf-cw domain in zinc finger cw-type pwwp domain protein 1
Structure deposition date
2006-12-25
Thiol separation (Å)
4
Half-sphere exposure sum ?
64
Minimum pKa ?
6
% buried
12
Peptide accession
Q9H0M4
Residue number A
259
Residue number B
285
Peptide name
Zinc finger CW-type PWWP domain protein 1

Ligandability

Cysteine 259 of Zinc finger CW-type PWWP domain protein 1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 285 of Zinc finger CW-type PWWP domain protein 1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Zinc finger CW-type PWWP domain protein 1 between cysteines 259 and 264.

Details

Redox score ?
88
PDB code
2rr4
Structure name
complex structure of the zf-cw domain and the h3k4me3 peptide
Structure deposition date
2010-03-24
Thiol separation (Å)
4
Half-sphere exposure sum ?
54
Minimum pKa ?
6
% buried
12
Peptide accession
Q9H0M4
Residue number A
259
Residue number B
264
Peptide name
Zinc finger CW-type PWWP domain protein 1

Ligandability

Cysteine 259 of Zinc finger CW-type PWWP domain protein 1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 264 of Zinc finger CW-type PWWP domain protein 1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Zinc finger CW-type PWWP domain protein 1 between cysteines 259 and 296.

Details

Redox score ?
84
PDB code
2rr4
Structure name
complex structure of the zf-cw domain and the h3k4me3 peptide
Structure deposition date
2010-03-24
Thiol separation (Å)
4
Half-sphere exposure sum ?
58
Minimum pKa ?
7
% buried
9
Peptide accession
Q9H0M4
Residue number A
259
Residue number B
296
Peptide name
Zinc finger CW-type PWWP domain protein 1

Ligandability

Cysteine 259 of Zinc finger CW-type PWWP domain protein 1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 296 of Zinc finger CW-type PWWP domain protein 1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Zinc finger CW-type PWWP domain protein 1 between cysteines 285 and 296.

Details

Redox score ?
80
PDB code
2rr4
Structure name
complex structure of the zf-cw domain and the h3k4me3 peptide
Structure deposition date
2010-03-24
Thiol separation (Å)
4
Half-sphere exposure sum ?
59
Minimum pKa ?
10
% buried
14
Peptide accession
Q9H0M4
Residue number A
285
Residue number B
296
Peptide name
Zinc finger CW-type PWWP domain protein 1

Ligandability

Cysteine 285 of Zinc finger CW-type PWWP domain protein 1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 296 of Zinc finger CW-type PWWP domain protein 1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Zinc finger CW-type PWWP domain protein 1 between cysteines 253 and 271. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
43
PDB code
2rr4
Structure name
complex structure of the zf-cw domain and the h3k4me3 peptide
Structure deposition date
2010-03-24
Thiol separation (Å)
10
Half-sphere exposure sum ?
41
Minimum pKa ?
9
% buried
0
Peptide accession
Q9H0M4
Residue number A
253
Residue number B
271
Peptide name
Zinc finger CW-type PWWP domain protein 1

Ligandability

Cysteine 253 of Zinc finger CW-type PWWP domain protein 1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 271 of Zinc finger CW-type PWWP domain protein 1

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

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