ReDisulphID

a tool for identifying drug-targetable redox-active disulphides

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Fanconi anemia group I protein homolog

Intramolecular
Cysteine 1081 and cysteine 1159
Cysteine 670 and cysteine 674
Cysteine 750 and cysteine 777
Cysteine 71 and cysteine 72
Cysteine 650 and cysteine 742
Cysteine 1014 and cysteine 1025
Cysteine 741 and cysteine 743
Cysteine 557 and cysteine 583
Cysteine 669 and cysteine 670
Cysteine 669 and cysteine 674
Cysteine 304 and cysteine 306 L
A redox-regulated disulphide may form within Fanconi anemia group I protein homolog between cysteines 1081 and 1159.

Details

Redox score ?
81
PDB code
3s51
Structure name
structure of fanci
Structure deposition date
2011-05-20
Thiol separation (Å)
4
Half-sphere exposure sum ?
74
Minimum pKa ?
6
% buried
60
Peptide accession
Q8K368
Residue number A
1081
Residue number B
1159
Peptide name
Fanconi anemia group I protein homolog

Ligandability

Cysteine 1081 of Fanconi anemia group I protein homolog

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 1159 of Fanconi anemia group I protein homolog

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Fanconi anemia group I protein between cysteines 670 and 674.

Details

Redox score ?
65
PDB code
7ay1
Structure name
cryo-em structure of usp1-uaf1 bound to mono-ubiquitinated fancd2, and fanci
Structure deposition date
2020-11-10
Thiol separation (Å)
4
Half-sphere exposure sum ?
80
Minimum pKa ?
9
% buried
100
Peptide accession
Q9NVI1
Residue number A
670
Residue number B
674
Peptide name
Fanconi anemia group I protein

Ligandability

Cysteine 670 of Fanconi anemia group I protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 674 of Fanconi anemia group I protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Fanconi anemia group I protein between cysteines 750 and 777. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
51
PDB code
7ay1
Structure name
cryo-em structure of usp1-uaf1 bound to mono-ubiquitinated fancd2, and fanci
Structure deposition date
2020-11-10
Thiol separation (Å)
7
Half-sphere exposure sum ?
71
Minimum pKa ?
10
% buried
75
Peptide accession
Q9NVI1
Residue number A
750
Residue number B
777
Peptide name
Fanconi anemia group I protein

Ligandability

Cysteine 750 of Fanconi anemia group I protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 777 of Fanconi anemia group I protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Fanconi anemia group I protein homolog between cysteines 71 and 72. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
51
PDB code
3s51
Structure name
structure of fanci
Structure deposition date
2011-05-20
Thiol separation (Å)
7
Half-sphere exposure sum ?
65
Minimum pKa ?
10
% buried
68
Peptide accession
Q8K368
Residue number A
71
Residue number B
72
Peptide name
Fanconi anemia group I protein homolog

Ligandability

Cysteine 71 of Fanconi anemia group I protein homolog

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 72 of Fanconi anemia group I protein homolog

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Fanconi anemia group I protein between cysteines 650 and 742. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
50
PDB code
8a9k
Structure name
cryo-em structure of usp1-uaf1 bound to fanci and mono-ubiquitinated fancd2 with ml323 (consensus reconstruction)
Structure deposition date
2022-06-28
Thiol separation (Å)
7
Half-sphere exposure sum ?
73
Minimum pKa ?
11
% buried
71
Peptide accession
Q9NVI1
Residue number A
650
Residue number B
742
Peptide name
Fanconi anemia group I protein

Ligandability

Cysteine 650 of Fanconi anemia group I protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 742 of Fanconi anemia group I protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Fanconi anemia group I protein between cysteines 1014 and 1025. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
46
PDB code
8a9j
Structure name
cryo-em structure of usp1-uaf1 bound to fanci and mono-ubiquitinated fancd2 without ml323 (consensus reconstruction)
Structure deposition date
2022-06-28
Thiol separation (Å)
7
Half-sphere exposure sum ?
71
Minimum pKa ?
12
% buried
91
Peptide accession
Q9NVI1
Residue number A
1014
Residue number B
1025
Peptide name
Fanconi anemia group I protein

Ligandability

Cysteine 1014 of Fanconi anemia group I protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 1025 of Fanconi anemia group I protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Fanconi anemia group I protein homolog between cysteines 741 and 743. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
43
PDB code
3s51
Structure name
structure of fanci
Structure deposition date
2011-05-20
Thiol separation (Å)
9
Half-sphere exposure sum ?
68
Minimum pKa ?
10
% buried
34
Peptide accession
Q8K368
Residue number A
741
Residue number B
743
Peptide name
Fanconi anemia group I protein homolog

Ligandability

Cysteine 741 of Fanconi anemia group I protein homolog

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 743 of Fanconi anemia group I protein homolog

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Fanconi anemia group I protein homolog between cysteines 557 and 583. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
43
PDB code
3s4w
Structure name
structure of the fanci-fancd2 complex
Structure deposition date
2011-05-20
Thiol separation (Å)
7
Half-sphere exposure sum ?
83
Minimum pKa ?
12
% buried
99
Peptide accession
Q8K368
Residue number A
557
Residue number B
583
Peptide name
Fanconi anemia group I protein homolog

Ligandability

Cysteine 557 of Fanconi anemia group I protein homolog

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 583 of Fanconi anemia group I protein homolog

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Fanconi anemia group I protein between cysteines 669 and 670. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
41
PDB code
8a9k
Structure name
cryo-em structure of usp1-uaf1 bound to fanci and mono-ubiquitinated fancd2 with ml323 (consensus reconstruction)
Structure deposition date
2022-06-28
Thiol separation (Å)
8
Half-sphere exposure sum ?
82
Minimum pKa ?
10
% buried
100
Peptide accession
Q9NVI1
Residue number A
669
Residue number B
670
Peptide name
Fanconi anemia group I protein

Ligandability

Cysteine 669 of Fanconi anemia group I protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 670 of Fanconi anemia group I protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Fanconi anemia group I protein between cysteines 669 and 674. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
35
PDB code
8a9k
Structure name
cryo-em structure of usp1-uaf1 bound to fanci and mono-ubiquitinated fancd2 with ml323 (consensus reconstruction)
Structure deposition date
2022-06-28
Thiol separation (Å)
9
Half-sphere exposure sum ?
80
Minimum pKa ?
9
% buried
100
Peptide accession
Q9NVI1
Residue number A
669
Residue number B
674
Peptide name
Fanconi anemia group I protein

Ligandability

Cysteine 669 of Fanconi anemia group I protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 674 of Fanconi anemia group I protein

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within Fanconi anemia group I protein homolog between cysteines 304 and 306. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
32
PDB code
3s51
Structure name
structure of fanci
Structure deposition date
2011-05-20
Thiol separation (Å)
10
Half-sphere exposure sum ?
72
Minimum pKa ?
10
% buried
79
Peptide accession
Q8K368
Residue number A
304
Residue number B
306
Peptide name
Fanconi anemia group I protein homolog

Ligandability

Cysteine 304 of Fanconi anemia group I protein homolog

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 306 of Fanconi anemia group I protein homolog

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Ligandable in the dataset of Kuljanin et al.

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