Sodium channel protein type 3 subunit alpha
Intermolecular
Cysteine 55 of Sodium channel subunit beta-2 and cysteine 911
Cysteine 181 of Sodium channel subunit beta-1 and cysteine 1199
Intramolecular
Cysteine 913 and cysteine 919
Cysteine 951 and cysteine 960
Cysteine 1364 and cysteine 1384
Cysteine 277 and cysteine 337
Cysteine 742 and cysteine 743
Cysteine 1726 and cysteine 1741
Cysteine 337 and cysteine 352
Cysteine 277 and cysteine 346
More...Cysteine 277 and cysteine 352
Cysteine 337 and cysteine 346
Cysteine 346 and cysteine 352
Cysteine 911 and cysteine 960
7w7f C 55 D 911
A redox-regulated disulphide may form between cysteine 55 of Sodium channel subunit beta-2 and cysteine 911 of Sodium channel protein type 3 subunit alpha.
Details
Redox score ?
81
PDB code
7w7f
Structure name
cryo-em structure of human nav1
Structure deposition date
2021-12-04
Thiol separation (Å)
2
Half-sphere exposure sum ?
64
Minimum pKa ?
nan
% buried
nan
Peptide A name
Sodium channel subunit beta-2
Peptide B name
Sodium channel protein type 3 subunit alpha
Peptide A accession
O60939
Peptide B accession
Q9NY46
Peptide A residue number
55
Peptide B residue number
911
Ligandability
Cysteine 55 of Sodium channel subunit beta-2
Cysteine 911 of Sodium channel protein type 3 subunit alpha
7w77 B 181 D 1199
A redox-regulated disulphide may form between cysteine 181 of Sodium channel subunit beta-1 and cysteine 1199 of Sodium channel protein type 3 subunit alpha. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?
Details
Redox score ?
45
PDB code
7w77
Structure name
cryo-em structure of human nav1
Structure deposition date
2021-12-03
Thiol separation (Å)
9
Half-sphere exposure sum ?
60
Minimum pKa ?
10
% buried
40
Peptide A name
Sodium channel subunit beta-1
Peptide B name
Sodium channel protein type 3 subunit alpha
Peptide A accession
Q07699
Peptide B accession
Q9NY46
Peptide A residue number
181
Peptide B residue number
1199
Ligandability
Cysteine 181 of Sodium channel subunit beta-1
Cysteine 1199 of Sodium channel protein type 3 subunit alpha
7w7f D 913 D 919
A redox-regulated disulphide may form within Sodium channel protein type 3 subunit alpha between cysteines 913 and 919.
Details
Redox score ?
86
PDB code
7w7f
Structure name
cryo-em structure of human nav1
Structure deposition date
2021-12-04
Thiol separation (Å)
2
Half-sphere exposure sum ?
46
Minimum pKa ?
nan
% buried
nan
Peptide accession
Q9NY46
Residue number A
913
Residue number B
919
Peptide name
Sodium channel protein type 3 subunit alpha
Ligandability
Cysteine 913 of Sodium channel protein type 3 subunit alpha
Cysteine 919 of Sodium channel protein type 3 subunit alpha
7w7f D 951 D 960
A redox-regulated disulphide may form within Sodium channel protein type 3 subunit alpha between cysteines 951 and 960.
Details
Redox score ?
85
PDB code
7w7f
Structure name
cryo-em structure of human nav1
Structure deposition date
2021-12-04
Thiol separation (Å)
2
Half-sphere exposure sum ?
72
Minimum pKa ?
nan
% buried
nan
Peptide accession
Q9NY46
Residue number A
951
Residue number B
960
Peptide name
Sodium channel protein type 3 subunit alpha
Ligandability
Cysteine 951 of Sodium channel protein type 3 subunit alpha
Cysteine 960 of Sodium channel protein type 3 subunit alpha
7w77 D 1364 D 1384
A redox-regulated disulphide may form within Sodium channel protein type 3 subunit alpha between cysteines 1364 and 1384.
Details
Redox score ?
85
PDB code
7w77
Structure name
cryo-em structure of human nav1
Structure deposition date
2021-12-03
Thiol separation (Å)
2
Half-sphere exposure sum ?
70
Minimum pKa ?
nan
% buried
nan
Peptide accession
Q9NY46
Residue number A
1364
Residue number B
1384
Peptide name
Sodium channel protein type 3 subunit alpha
Ligandability
Cysteine 1364 of Sodium channel protein type 3 subunit alpha
Cysteine 1384 of Sodium channel protein type 3 subunit alpha
7w7f D 277 D 337
A redox-regulated disulphide may form within Sodium channel protein type 3 subunit alpha between cysteines 277 and 337.
Details
Redox score ?
72
PDB code
7w7f
Structure name
cryo-em structure of human nav1
Structure deposition date
2021-12-04
Thiol separation (Å)
3
Half-sphere exposure sum ?
81
Minimum pKa ?
8
% buried
98
Peptide accession
Q9NY46
Residue number A
277
Residue number B
337
Peptide name
Sodium channel protein type 3 subunit alpha
Ligandability
Cysteine 277 of Sodium channel protein type 3 subunit alpha
Cysteine 337 of Sodium channel protein type 3 subunit alpha
7w7f D 742 D 743
A redox-regulated disulphide may form within Sodium channel protein type 3 subunit alpha between cysteines 742 and 743.
Details
Redox score ?
65
PDB code
7w7f
Structure name
cryo-em structure of human nav1
Structure deposition date
2021-12-04
Thiol separation (Å)
7
Half-sphere exposure sum ?
17
Minimum pKa ?
9
% buried
0
Peptide accession
Q9NY46
Residue number A
742
Residue number B
743
Peptide name
Sodium channel protein type 3 subunit alpha
Ligandability
Cysteine 742 of Sodium channel protein type 3 subunit alpha
Cysteine 743 of Sodium channel protein type 3 subunit alpha
7w77 D 1726 D 1741
A redox-regulated disulphide may form within Sodium channel protein type 3 subunit alpha between cysteines 1726 and 1741.
Details
Redox score ?
64
PDB code
7w77
Structure name
cryo-em structure of human nav1
Structure deposition date
2021-12-03
Thiol separation (Å)
6
Half-sphere exposure sum ?
59
Minimum pKa ?
10
% buried
28
Peptide accession
Q9NY46
Residue number A
1726
Residue number B
1741
Peptide name
Sodium channel protein type 3 subunit alpha
Ligandability
Cysteine 1726 of Sodium channel protein type 3 subunit alpha
Cysteine 1741 of Sodium channel protein type 3 subunit alpha
7w7f D 337 D 352
A redox-regulated disulphide may form within Sodium channel protein type 3 subunit alpha between cysteines 337 and 352. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?
Details
Redox score ?
57
PDB code
7w7f
Structure name
cryo-em structure of human nav1
Structure deposition date
2021-12-04
Thiol separation (Å)
6
Half-sphere exposure sum ?
78
Minimum pKa ?
8
% buried
80
Peptide accession
Q9NY46
Residue number A
337
Residue number B
352
Peptide name
Sodium channel protein type 3 subunit alpha
Ligandability
Cysteine 337 of Sodium channel protein type 3 subunit alpha
Cysteine 352 of Sodium channel protein type 3 subunit alpha
7w7f D 277 D 346
A redox-regulated disulphide may form within Sodium channel protein type 3 subunit alpha between cysteines 277 and 346. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?
Details
Redox score ?
56
PDB code
7w7f
Structure name
cryo-em structure of human nav1
Structure deposition date
2021-12-04
Thiol separation (Å)
6
Half-sphere exposure sum ?
76
Minimum pKa ?
10
% buried
83
Peptide accession
Q9NY46
Residue number A
277
Residue number B
346
Peptide name
Sodium channel protein type 3 subunit alpha
Ligandability
Cysteine 277 of Sodium channel protein type 3 subunit alpha
Cysteine 346 of Sodium channel protein type 3 subunit alpha
7w77 D 277 D 352
A redox-regulated disulphide may form within Sodium channel protein type 3 subunit alpha between cysteines 277 and 352. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?
Details
Redox score ?
56
PDB code
7w77
Structure name
cryo-em structure of human nav1
Structure deposition date
2021-12-03
Thiol separation (Å)
6
Half-sphere exposure sum ?
74
Minimum pKa ?
12
% buried
nan
Peptide accession
Q9NY46
Residue number A
277
Residue number B
352
Peptide name
Sodium channel protein type 3 subunit alpha
Ligandability
Cysteine 277 of Sodium channel protein type 3 subunit alpha
Cysteine 352 of Sodium channel protein type 3 subunit alpha
7w77 D 337 D 346
A redox-regulated disulphide may form within Sodium channel protein type 3 subunit alpha between cysteines 337 and 346. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?
Details
Redox score ?
53
PDB code
7w77
Structure name
cryo-em structure of human nav1
Structure deposition date
2021-12-03
Thiol separation (Å)
7
Half-sphere exposure sum ?
82
Minimum pKa ?
9
% buried
nan
Peptide accession
Q9NY46
Residue number A
337
Residue number B
346
Peptide name
Sodium channel protein type 3 subunit alpha
Ligandability
Cysteine 337 of Sodium channel protein type 3 subunit alpha
Cysteine 346 of Sodium channel protein type 3 subunit alpha
7w77 D 346 D 352
A redox-regulated disulphide may form within Sodium channel protein type 3 subunit alpha between cysteines 346 and 352. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?
Details
Redox score ?
53
PDB code
7w77
Structure name
cryo-em structure of human nav1
Structure deposition date
2021-12-03
Thiol separation (Å)
7
Half-sphere exposure sum ?
74
Minimum pKa ?
9
% buried
74
Peptide accession
Q9NY46
Residue number A
346
Residue number B
352
Peptide name
Sodium channel protein type 3 subunit alpha
Ligandability
Cysteine 346 of Sodium channel protein type 3 subunit alpha
Cysteine 352 of Sodium channel protein type 3 subunit alpha
7w77 D 911 D 960
A redox-regulated disulphide may form within Sodium channel protein type 3 subunit alpha between cysteines 911 and 960. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?
Details
Redox score ?
37
PDB code
7w77
Structure name
cryo-em structure of human nav1
Structure deposition date
2021-12-03
Thiol separation (Å)
10
Half-sphere exposure sum ?
69
Minimum pKa ?
nan
% buried
nan
Peptide accession
Q9NY46
Residue number A
911
Residue number B
960
Peptide name
Sodium channel protein type 3 subunit alpha
Ligandability
Cysteine 911 of Sodium channel protein type 3 subunit alpha
Cysteine 960 of Sodium channel protein type 3 subunit alpha
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