ReDisulphID

a tool for identifying drug-targetable redox-active disulphides

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F-box/LRR-repeat protein 3

Intermolecular
Cysteine 430 of Cryptochrome-2 and cysteine 340
Cysteine 432 of Cryptochrome-2 and cysteine 340
Cysteine 381 of Cryptochrome-2 and cysteine 340
Intramolecular
Cysteine 331 and cysteine 358
Cysteine 218 and cysteine 223
Cysteine 358 and cysteine 383
Cysteine 340 and cysteine 369
A redox-regulated disulphide may form between cysteine 430 of Cryptochrome-2 and cysteine 340 of F-box/LRR-repeat protein 3.

Details

Redox score ?
77
PDB code
4i6j
Structure name
a ubiquitin ligase-substrate complex
Structure deposition date
2012-11-29
Thiol separation (Å)
2
Half-sphere exposure sum ?
89
Minimum pKa ?
nan
% buried
nan
Peptide A name
Cryptochrome-2
Peptide B name
F-box/LRR-repeat protein 3
Peptide A accession
Q9R194
Peptide B accession
Q9UKT7
Peptide A residue number
430
Peptide B residue number
340

Ligandability

Cysteine 430 of Cryptochrome-2

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 340 of F-box/LRR-repeat protein 3

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form between cysteine 432 of Cryptochrome-2 and cysteine 340 of F-box/LRR-repeat protein 3. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
48
PDB code
4i6j
Structure name
a ubiquitin ligase-substrate complex
Structure deposition date
2012-11-29
Thiol separation (Å)
8
Half-sphere exposure sum ?
87
Minimum pKa ?
5
% buried
nan
Peptide A name
Cryptochrome-2
Peptide B name
F-box/LRR-repeat protein 3
Peptide A accession
Q9R194
Peptide B accession
Q9UKT7
Peptide A residue number
432
Peptide B residue number
340

Ligandability

Cysteine 432 of Cryptochrome-2

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 340 of F-box/LRR-repeat protein 3

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form between cysteine 381 of Cryptochrome-2 and cysteine 340 of F-box/LRR-repeat protein 3. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
31
PDB code
4i6j
Structure name
a ubiquitin ligase-substrate complex
Structure deposition date
2012-11-29
Thiol separation (Å)
10
Half-sphere exposure sum ?
82
Minimum pKa ?
10
% buried
nan
Peptide A name
Cryptochrome-2
Peptide B name
F-box/LRR-repeat protein 3
Peptide A accession
Q9R194
Peptide B accession
Q9UKT7
Peptide A residue number
381
Peptide B residue number
340

Ligandability

Cysteine 381 of Cryptochrome-2

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 340 of F-box/LRR-repeat protein 3

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within F-box/LRR-repeat protein 3 between cysteines 331 and 358. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
53
PDB code
4i6j
Structure name
a ubiquitin ligase-substrate complex
Structure deposition date
2012-11-29
Thiol separation (Å)
7
Half-sphere exposure sum ?
70
Minimum pKa ?
12
% buried
85
Peptide accession
Q9UKT7
Residue number A
331
Residue number B
358
Peptide name
F-box/LRR-repeat protein 3

Ligandability

Cysteine 331 of F-box/LRR-repeat protein 3

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 358 of F-box/LRR-repeat protein 3

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within F-box/LRR-repeat protein 3 between cysteines 218 and 223. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
52
PDB code
4i6j
Structure name
a ubiquitin ligase-substrate complex
Structure deposition date
2012-11-29
Thiol separation (Å)
8
Half-sphere exposure sum ?
62
Minimum pKa ?
9
% buried
39
Peptide accession
Q9UKT7
Residue number A
218
Residue number B
223
Peptide name
F-box/LRR-repeat protein 3

Ligandability

Cysteine 218 of F-box/LRR-repeat protein 3

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 223 of F-box/LRR-repeat protein 3

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within F-box/LRR-repeat protein 3 between cysteines 358 and 383. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
42
PDB code
4i6j
Structure name
a ubiquitin ligase-substrate complex
Structure deposition date
2012-11-29
Thiol separation (Å)
9
Half-sphere exposure sum ?
67
Minimum pKa ?
10
% buried
68
Peptide accession
Q9UKT7
Residue number A
358
Residue number B
383
Peptide name
F-box/LRR-repeat protein 3

Ligandability

Cysteine 358 of F-box/LRR-repeat protein 3

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 383 of F-box/LRR-repeat protein 3

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

A redox-regulated disulphide may form within F-box/LRR-repeat protein 3 between cysteines 340 and 369. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
30
PDB code
4i6j
Structure name
a ubiquitin ligase-substrate complex
Structure deposition date
2012-11-29
Thiol separation (Å)
10
Half-sphere exposure sum ?
77
Minimum pKa ?
12
% buried
nan
Peptide accession
Q9UKT7
Residue number A
340
Residue number B
369
Peptide name
F-box/LRR-repeat protein 3

Ligandability

Cysteine 340 of F-box/LRR-repeat protein 3

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

Cysteine 369 of F-box/LRR-repeat protein 3

Not ligandable in the dataset of Yang et al.

Not ligandable in the dataset of Yan et al.

Not ligandable in the dataset of Backus et al.

Not ligandable in the dataset of Vinogradova et al.

Not ligandable in the dataset of Cao et al.

Not ligandable in the dataset of Kuljanin et al.

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