Protein-arginine deiminase type-4
Intramolecular
Cysteine 311 and cysteine 337
Cysteine 610 and cysteine 611
Cysteine 617 and cysteine 627
Cysteine 30 and cysteine 37
Cysteine 311 and cysteine 645
Cysteine 434 and cysteine 545
Cysteine 497 and cysteine 610
Cysteine 154 and cysteine 166
Cysteine 497 and cysteine 611
Cysteine 610 and cysteine 617
3apn A 311 A 337
A redox-regulated disulphide may form within Protein-arginine deiminase type-4 between cysteines 311 and 337.
Details
Redox score ?
77
PDB code
3apn
Structure name
crystal structure of the human wild-type pad4 protein
Structure deposition date
2010-10-19
Thiol separation (Å)
5
Half-sphere exposure sum ?
nan
Minimum pKa ?
9
% buried
0
Peptide accession
Q9UM07
Residue number A
311
Residue number B
337
Peptide name
Protein-arginine deiminase type-4
Ligandability
Cysteine 311 of Protein-arginine deiminase type-4
Cysteine 337 of Protein-arginine deiminase type-4
4x8c A 610 A 611
A redox-regulated disulphide may form within Protein-arginine deiminase type-4 between cysteines 610 and 611.
Details
Redox score ?
76
PDB code
4x8c
Structure name
crystal structure of human peptidylarginine deiminase type4 (pad4) in complex with gsk147
Structure deposition date
2014-12-10
Thiol separation (Å)
4
Half-sphere exposure sum ?
nan
Minimum pKa ?
9
% buried
40
Peptide accession
Q9UM07
Residue number A
610
Residue number B
611
Peptide name
Protein-arginine deiminase type-4
Ligandability
Cysteine 610 of Protein-arginine deiminase type-4
Cysteine 611 of Protein-arginine deiminase type-4
5n0m A 617 A 627
A redox-regulated disulphide may form within Protein-arginine deiminase type-4 between cysteines 617 and 627.
Details
Redox score ?
69
PDB code
5n0m
Structure name
hpad4 crystal complex with bb-f-amidine
Structure deposition date
2017-02-03
Thiol separation (Å)
4
Half-sphere exposure sum ?
60
Minimum pKa ?
10
% buried
50
Peptide accession
Q9UM07
Residue number A
617
Residue number B
627
Peptide name
Protein-arginine deiminase type-4
Ligandability
Cysteine 617 of Protein-arginine deiminase type-4
Cysteine 627 of Protein-arginine deiminase type-4
4x8c A 30 A 37
A redox-regulated disulphide may form within Protein-arginine deiminase type-4 between cysteines 30 and 37. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?
Details
Redox score ?
54
PDB code
4x8c
Structure name
crystal structure of human peptidylarginine deiminase type4 (pad4) in complex with gsk147
Structure deposition date
2014-12-10
Thiol separation (Å)
9
Half-sphere exposure sum ?
nan
Minimum pKa ?
9
% buried
0
Peptide accession
Q9UM07
Residue number A
30
Residue number B
37
Peptide name
Protein-arginine deiminase type-4
Ligandability
Cysteine 30 of Protein-arginine deiminase type-4
Cysteine 37 of Protein-arginine deiminase type-4
1wd8 A 311 A 645
A redox-regulated disulphide may form within Protein-arginine deiminase type-4 between cysteines 311 and 645. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?
Details
Redox score ?
48
PDB code
1wd8
Structure name
calcium free form of human peptidylarginine deiminase type4 (pad4)
Structure deposition date
2004-05-12
Thiol separation (Å)
10
Half-sphere exposure sum ?
nan
Minimum pKa ?
9
% buried
30
Peptide accession
Q9UM07
Residue number A
311
Residue number B
645
Peptide name
Protein-arginine deiminase type-4
Ligandability
Cysteine 311 of Protein-arginine deiminase type-4
Cysteine 645 of Protein-arginine deiminase type-4
5n1b A 434 A 545
A redox-regulated disulphide may form within Protein-arginine deiminase type-4 between cysteines 434 and 545. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?
Details
Redox score ?
48
PDB code
5n1b
Structure name
hpad4 crystal complex with afm-14a
Structure deposition date
2017-02-06
Thiol separation (Å)
8
Half-sphere exposure sum ?
53
Minimum pKa ?
10
% buried
48
Peptide accession
Q9UM07
Residue number A
434
Residue number B
545
Peptide name
Protein-arginine deiminase type-4
Ligandability
Cysteine 434 of Protein-arginine deiminase type-4
Cysteine 545 of Protein-arginine deiminase type-4
4x8c A 497 A 610
A redox-regulated disulphide may form within Protein-arginine deiminase type-4 between cysteines 497 and 610. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?
Details
Redox score ?
46
PDB code
4x8c
Structure name
crystal structure of human peptidylarginine deiminase type4 (pad4) in complex with gsk147
Structure deposition date
2014-12-10
Thiol separation (Å)
9
Half-sphere exposure sum ?
nan
Minimum pKa ?
9
% buried
72
Peptide accession
Q9UM07
Residue number A
497
Residue number B
610
Peptide name
Protein-arginine deiminase type-4
Ligandability
Cysteine 497 of Protein-arginine deiminase type-4
Cysteine 610 of Protein-arginine deiminase type-4
2dey X 154 X 166
A redox-regulated disulphide may form within Protein-arginine deiminase type-4 between cysteines 154 and 166. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?
Details
Redox score ?
42
PDB code
2dey
Structure name
crystal structure of human peptidylarginine deiminase 4 in complex with histone h4 n-terminal tail including arg3
Structure deposition date
2006-02-18
Thiol separation (Å)
7
Half-sphere exposure sum ?
80
Minimum pKa ?
12
% buried
97
Peptide accession
Q9UM07
Residue number A
154
Residue number B
166
Peptide name
Protein-arginine deiminase type-4
Ligandability
Cysteine 154 of Protein-arginine deiminase type-4
Cysteine 166 of Protein-arginine deiminase type-4
4x8g A 497 A 611
A redox-regulated disulphide may form within Protein-arginine deiminase type-4 between cysteines 497 and 611. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?
Details
Redox score ?
41
PDB code
4x8g
Structure name
crystal structure of human peptidylarginine deiminase type4 (pad4) in complex with gsk199
Structure deposition date
2014-12-10
Thiol separation (Å)
8
Half-sphere exposure sum ?
69
Minimum pKa ?
11
% buried
80
Peptide accession
Q9UM07
Residue number A
497
Residue number B
611
Peptide name
Protein-arginine deiminase type-4
Ligandability
Cysteine 497 of Protein-arginine deiminase type-4
Cysteine 611 of Protein-arginine deiminase type-4
1wd9 A 610 A 617
A redox-regulated disulphide may form within Protein-arginine deiminase type-4 between cysteines 610 and 617. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?
Details
Redox score ?
41
PDB code
1wd9
Structure name
calcium bound form of human peptidylarginine deiminase type4 (pad4)
Structure deposition date
2004-05-12
Thiol separation (Å)
9
Half-sphere exposure sum ?
51
Minimum pKa ?
11
% buried
57
Peptide accession
Q9UM07
Residue number A
610
Residue number B
617
Peptide name
Protein-arginine deiminase type-4
Ligandability
Cysteine 610 of Protein-arginine deiminase type-4
Cysteine 617 of Protein-arginine deiminase type-4
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