ReDisulphID

a tool for identifying drug-targetable redox-active disulphides

Tumor necrosis factor ligand superfamily member 13B

Intermolecular
Cysteine 245 and cysteine 245
Cysteine 232 and cysteine 232
Intramolecular
Cysteine 232 and cysteine 245
A redox-regulated disulphide may form between two units of Tumor necrosis factor ligand superfamily member 13B at cysteines 245 and 245. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
35
PDB code
6fxn
Structure name
crystal structure of human baff in complex with fab fragment of anti- baff antibody belimumab
Structure deposition date
2018-03-09
Thiol separation (Å)
9
Half-sphere exposure sum ?
96
Minimum pKa ?
nan
% buried
nan
Peptide A name
Tumor necrosis factor ligand superfamily member 13B
Peptide B name
Tumor necrosis factor ligand superfamily member 13B
Peptide A accession
Q9Y275
Peptide B accession
Q9Y275
Peptide A residue number
245
Peptide B residue number
245

Ligandability

A redox-regulated disulphide may form between two units of Tumor necrosis factor ligand superfamily member 13B at cysteines 232 and 232. However, the redox score of this cysteine pair is lower than any known redox-active intermolecular disulphide. ?

Details

Redox score ?
27
PDB code
6fxn
Structure name
crystal structure of human baff in complex with fab fragment of anti- baff antibody belimumab
Structure deposition date
2018-03-09
Thiol separation (Å)
10
Half-sphere exposure sum ?
95
Minimum pKa ?
nan
% buried
nan
Peptide A name
Tumor necrosis factor ligand superfamily member 13B
Peptide B name
Tumor necrosis factor ligand superfamily member 13B
Peptide A accession
Q9Y275
Peptide B accession
Q9Y275
Peptide A residue number
232
Peptide B residue number
232

Ligandability

A redox-regulated disulphide may form within Tumor necrosis factor ligand superfamily member 13B between cysteines 232 and 245 (91 and 104 respectively in this structure).

Details

Redox score ?
76
PDB code
1jh5
Structure name
crystal structure of stall-1 of tnf family ligand
Structure deposition date
2001-06-27
Thiol separation (Å)
3
Half-sphere exposure sum ?
93
Minimum pKa ?
5
% buried
100
Peptide accession
Q9Y275
Residue number A
232
Residue number B
245
Peptide name
Tumor necrosis factor ligand superfamily member 13B

Ligandability

Cysteine 232 of Tumor necrosis factor ligand superfamily member 13B

Cysteine 245 of Tumor necrosis factor ligand superfamily member 13B

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